STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAPN9Calpain 9; Belongs to the peptidase C2 family. (881 aa)    
Predicted Functional Partners:
CAST
Uncharacterized protein.
   
 
 0.796
LOC101749664
TGc domain-containing protein.
      
 0.702
SLC7A14
Solute carrier family 7 member 14.
   
  
 0.682
GALNT3
Polypeptide N-acetylgalactosaminyltransferase.
      
 0.667
RASD2
RASD family member 2.
      
 0.658
RPS4Y1
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
   
  
 0.610
B4GALT6
Uncharacterized protein.
   
  
 0.585
GIF
Uncharacterized protein.
      
 0.584
WASF3
WASP family member 3.
      
 0.581
CYGB
Cytoglobin; Belongs to the globin family.
   
  
 0.492
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.