STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBSL1Obscurin like 1. (2245 aa)    
Predicted Functional Partners:
C16orf96
Uncharacterized protein.
    
 
 0.751
LOC107055489
C-type lectin domain-containing protein.
    
 
 0.725
ZNF142
Zinc finger protein 142.
   
 
 0.713
GLB1L
Galactosidase beta 1 like; Belongs to the glycosyl hydrolase 35 family.
    
 
 0.710
CHIR-IG1-5-2
Ig-like domain-containing protein.
      
 0.709
CHIR-IG1-5
Ig-like domain-containing protein.
      
 0.709
TPBGL
LRRCT domain-containing protein.
    
 
 0.708
GMPPA
GDP-mannose pyrophosphorylase A.
    
 
 0.630
CHPF
Hexosyltransferase.
      
 0.630
ATP10B
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
    
 
 0.601
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.