Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RTTNRTTN_N domain-containing protein. (2228 aa)    
Predicted Functional Partners:
DCAF15
DDB1 and CUL4 associated factor 15.
      
 0.852
STIL
STIL centriolar assembly protein.
   
 
 0.800
CEP85
Centrosomal protein 85.
      
 0.797
CD226
CD226 molecule.
 
 
  
 0.771
MORN2
Uncharacterized protein.
      
 0.750
CENPJ
Centromere protein J.
   
 
 0.743
HYLS1
HYLS1 centriolar and ciliogenesis associated.
      
 0.720
DOK6
Docking protein 6.
      
 0.710
CEP120
Centrosomal protein 120.
      
 0.707
CEP44
Centrosomal protein 44.
      
 0.667
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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