STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFCAB6Uncharacterized protein. (100 aa)    
Predicted Functional Partners:
RIBC2
RIB43A domain with coiled-coils 2.
    
 
 0.855
MAFIP
Uncharacterized protein.
   
 
 0.838
DENND5A
DENN domain containing 5A.
      
 0.764
FAM183A
Uncharacterized protein.
    
 
 0.763
TEKT2
Tektin 2.
   
 
 0.747
TEKT1
Tektin 1.
   
 
 0.745
ARMC3
Armadillo repeat containing 3.
    
 
 0.728
DNAI1
Dynein axonemal intermediate chain 1.
   
 
 0.725
IQCD
IQ motif containing D.
   
 
 0.713
VWA3A
Von Willebrand factor A domain containing 3A.
   
  
 0.713
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.