STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROM1Uncharacterized protein. (868 aa)    
Predicted Functional Partners:
PRPH2
Peripherin-2; May be involved in the morphogenesis of retina outer segment disks and the development and maintenance of the retina ultrastructure.
   
  
 0.723
AIPL1
TPR_REGION domain-containing protein.
   
  
 0.705
PITPNM3
PITPNM family member 3.
      
 0.702
CDHR1
Cadherin-related family member 1; Potential calcium-dependent cell-adhesion protein.
   
 
 0.664
ALDH1A3
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
      
 0.630
RIMS1-2
PDZ domain-containing protein.
      
 0.622
RIMS1
C2 domain-containing protein.
      
 0.601
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
   
  
 0.544
UNC119
Unc-119 lipid binding chaperone.
      
 0.543
TBX4
T-Box protein 4.
      
 0.526
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.