STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC80Coiled-coil domain-containing protein 80; Promotes cell adhesion and matrix assembly (By similarity). May play a role in eye formation. (958 aa)    
Predicted Functional Partners:
BRS3
Bombesin-like peptide receptor subtype 3.5; Belongs to the G-protein coupled receptor 1 family.
      
 0.753
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.687
ADRA2C
Adrenoceptor alpha 2C.
      
 0.572
OXT
Mesotocin/neurophysin I prepropeptide; Belongs to the vasopressin/oxytocin family.
   
  
 0.526
ECM2
Extracellular matrix protein 2.
   
 
 0.509
TACR3
Tachykinin receptor 3; Belongs to the G-protein coupled receptor 1 family.
      
 0.487
CCL19-2
SCY domain-containing protein.
      
 0.469
CCL19
C-C motif chemokine.
      
 0.468
COL6A1
Collagen alpha-1(VI) chain; Collagen VI acts as a cell-binding protein; Belongs to the type VI collagen family.
   
  
 0.459
POSTN
Uncharacterized protein.
   
  
 0.449
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.