STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCL1Lymphotactin. (97 aa)    
Predicted Functional Partners:
XCR1
CCXC chemokine receptor 1 like.
   
 0.995
CCL5
C-C motif chemokine.
   
 
 0.938
CCL19
C-C motif chemokine.
   
 
 0.903
CXCL14
Jun-suppressed chemokine.
    
 
 0.894
CXCL12
SCY domain-containing protein; Belongs to the intercrine alpha (chemokine CxC) family.
   
 
 0.873
CCLL4
C-C motif chemokine.
   
 
 0.834
CCL26
Chemokine.
   
 
 0.739
CCL4-2
C-C motif chemokine 4 homolog; Monokine with inflammatory and chemokinetic properties.
   
 
 0.720
LOC417536
Chemokine.
   
 
 0.712
CCL4
C-C motif chemokine 4 homolog.
   
 
 0.711
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.