STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIX1Protein limb expression 1. (281 aa)    
Predicted Functional Partners:
RIOK2
RIO domain-containing protein.
 
    
 0.829
SLCO4C1
Solute carrier organic anion transporter family member.
   
  
 0.728
WWC2
WW and C2 domain containing 2.
      
 0.701
FAM174A
Family with sequence similarity 174 member A.
      
 0.701
KCNIP3
Uncharacterized protein.
      
 0.673
ISOC1
Isochorismatase domain containing 1.
      
 0.646
LNPEP
Leucyl and cystinyl aminopeptidase.
   
  
 0.643
DCHS1
Uncharacterized protein.
   
 
 0.633
ST8SIA4
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
   
  
 0.604
SHB
SH2 domain-containing protein.
      
 0.601
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.