STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMPRSS7Transmembrane serine protease 7; Belongs to the peptidase S1 family. (622 aa)    
Predicted Functional Partners:
TRAT1
T cell receptor associated transmembrane adaptor 1.
      
 0.700
GUCA1A
Guanylyl cyclase-activating protein 1; Stimulates retinal guanylyl cyclase when free calcium ions concentration is low and inhibits guanylyl cyclase when free calcium ions concentration is elevated. This Ca(2+)-sensitive regulation of retinal guanylyl cyclase is a key event in recovery of the dark state of rod photoreceptors following light exposure.
    
 
 0.650
TAGLN3
Transgelin; Belongs to the calponin family.
 
  
 
 0.637
DEPDC6
Uncharacterized protein.
    
 
 0.633
NECTIN3
Nectin cell adhesion molecule 3.
      
 0.601
ATP6AP2
Uncharacterized protein.
      
 0.600
AHSG
Alpha 2-HS glycoprotein.
   
 
 0.575
SERPINC1
Antithrombin-III; Belongs to the serpin family.
   
 
 0.529
DEPTOR
Uncharacterized protein.
    
 
 0.529
CD47
CD47 glycoprotein isoform A.
      
 0.434
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.