STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL5039S ribosomal protein L50, mitochondrial; Belongs to the mitochondrion-specific ribosomal protein mL50 family. (163 aa)    
Predicted Functional Partners:
MRPL30
Ribosomal_L30 domain-containing protein.
   
 
 0.965
MRPL51
39S ribosomal protein L51, mitochondrial; Belongs to the mitochondrion-specific ribosomal protein mL51 family.
   
 
 0.952
MRPL53
Uncharacterized protein.
   
 
 0.948
MRPL47
Mitochondrial ribosomal protein L47.
   
 
 0.939
MRPL39
Mitochondrial ribosomal protein L39.
   
 
 0.936
MRPS18A
Uncharacterized protein.
   
 
 0.935
MRPL32
Mitochondrial ribosomal protein L32.
   
   0.931
MRPL20
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.
   
 
 0.927
MRPL17
Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.927
MRPL46
MRP-L46 domain-containing protein.
   
 
 0.927
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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