STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HTR1B5-hydroxytryptamine receptor 1B. (379 aa)    
Predicted Functional Partners:
OXGR1
G_PROTEIN_RECEP_F1_2 domain-containing protein.
      
 0.666
HTR3A
Neur_chan_memb domain-containing protein.
   
  
 0.628
GABRA3
Gamma-aminobutyric acid type A receptor alpha3 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
  
 0.615
GRM4
Glutamate metabotropic receptor 4.
    
 
 0.614
GRIK1
Glutamate ionotropic receptor kainate type subunit 1.
   
  
 0.607
UTS2B
Uncharacterized protein.
      
 0.597
TRPC1
Transient receptor potential cation channel subfamily C member 1 isoform alpha; Belongs to the transient receptor (TC 1.A.4) family.
    
 
 0.552
GLRA2
Glycine receptor alpha 2; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
  
 0.545
CHRNA2
Neuronal acetylcholine receptor subunit alpha-2; After binding acetylcholine, the AChR responds by an extensive change in conformation that affects all subunits and leads to opening of an ion-conducting channel across the plasma membrane.
   
  
 0.537
HTR2C
5-hydroxytryptamine (Serotonin) receptor 2C.
   
0.537
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.