STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYAP1BSD domain-containing protein. (357 aa)    
Predicted Functional Partners:
NOC4L
Nucleolar complex protein 4 homolog.
      
 0.848
REPS2
Uncharacterized protein.
      
 0.774
AP1S2
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
   
  
 0.742
CTPS2
CTP synthase 2; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Constitutes the rate-limiting enzyme in the synthesis of cytosine nucleotides (By similarity).
   
  
 0.709
CA5B
Carbonic anhydrase 5B; Belongs to the alpha-carbonic anhydrase family.
      
 0.700
GALNT9
Polypeptide N-acetylgalactosaminyltransferase.
      
 0.685
RPH3A
C2 domain-containing protein.
      
 0.601
SYT11
Synaptotagmin 11.
   
  
 0.536
TMEM27
Collectrin domain-containing protein.
      
 0.532
RAB18
Ras-related protein Rab-18; Plays a role in apical endocytosis/recycling. May be implicated in transport between the plasma membrane and early endosomes. Plays a key role in eye and brain development and neurodegeneration (By similarity).
   
  
 0.522
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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