STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB39ARAB39A, member RAS oncogene family. (216 aa)    
Predicted Functional Partners:
NOL10
Nucleolar protein 10.
      
 0.903
CEP170B
CEP170_C domain-containing protein.
    
 
 0.856
CWF19L2
CWF19 like cell cycle control factor 2.
      
 0.855
SLC35F2
Solute carrier family 35 member F2.
      
 0.847
KIAA0513
KIAA0513.
    
 
 0.843
WDR92
WD_REPEATS_REGION domain-containing protein.
   
 
 0.732
GCLM
Uncharacterized protein.
    
 
 0.724
FNBP1L
Formin binding protein 1 like.
    
 
 0.723
YEATS2
YEATS domain containing 2.
      
 0.723
INTS9
Integrator complex subunit 9; Component of the Integrator complex, a complex involved in the small nuclear RNAs (snRNA) U1 and U2 transcription and in their 3'- box-dependent processing; Belongs to the metallo-beta-lactamase superfamily. RNA- metabolizing metallo-beta-lactamase-like family. INTS9 subfamily.
      
 0.717
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.