STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMOD3Leiomodin 3. (524 aa)    
Predicted Functional Partners:
KLHL40
Kelch like family member 40.
   
 
 0.873
LRRC39
Leucine rich repeat containing 39.
   
 
 0.808
SDR42E2
3Beta_HSD domain-containing protein.
      
 0.765
C21orf58
Chromosome 21 open reading frame 58.
      
 0.743
KBTBD13
Kelch repeat and BTB domain containing 13.
   
  
 0.724
RNF207
Ring finger protein 207.
      
 0.706
CACNG1
Voltage-dependent calcium channel gamma-1 subunit; Regulatory subunit of the voltage-gated calcium channel that gives rise to L-type calcium currents in skeletal muscle. Regulates channel inactivation kinetics.
   
  
 0.691
KLHL41
Kelch like family member 41.
   
 
 0.679
UNC45B
Unc-45 myosin chaperone B.
   
  
 0.671
MYPN
Myopalladin.
   
  
 0.668
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.