STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AvBD7Gallinacin-7; Has bactericidal activity. (67 aa)    
Predicted Functional Partners:
DEFB4A
Gallinacin-2; Potent antibacterial activity against the Gram-negative bacterium E.coli ML-35, and against the Gram-positive bacterium L.monocytogenes EGD. Lacks antifungal activity against C.albicans.
   
 
 0.978
AvBD1
Gallinacin-1; Has bactericidal activity. Potent activity against E.coli ML- 35, L.monocytogenes EGD and C.albicans.
   
 
 0.977
AvBD5
Gallinacin-5; Has bactericidal activity.
   
 
 0.956
AvBD4
Gallinacin-4; Has bactericidal activity. Potent activity against S.typhimurium and S.entiriditis.
   
 
 0.924
AvBD14
Gallinacin-14; Has bactericidal activity; Belongs to the beta-defensin family.
     
 0.912
AvBD3
Gallinacin-3; Has bactericidal activity.
     
 0.906
AvBD9
Gallinacin-9; Has bactericidal activity. Potent activity against C.jejuni, C.perfringens, S.aureus, C.albicans and S.cerevisiae. Less potent against S.typhimurium and E.coli.
   
 
 0.906
AvBD8
Gallinacin-8; Has bactericidal activity.
     
 0.905
AvBD10
Gallinacin-10; Has bactericidal activity.
      
 0.850
AvBD12
Gallinacin-12; Has bactericidal activity.
      
 0.849
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.