STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC21BTetratricopeptide repeat domain 21B. (1411 aa)    
Predicted Functional Partners:
IFT122
Intraflagellar transport 122.
   
 0.996
WDR35
WD repeat-containing protein 35.
   
 0.996
IFT43
Intraflagellar transport 43.
    
 0.995
IFT140
WD_REPEATS_REGION domain-containing protein.
   
 0.988
WDR19
WD_REPEATS_REGION domain-containing protein.
   
 0.976
E1C1Y1_CHICK
Uncharacterized protein.
   
 0.903
DYNC2LI1
Dynein cytoplasmic 2 light intermediate chain 1.
   
 
 0.888
IFT80
Intraflagellar transport 80.
   
 0.884
IFT172
Intraflagellar transport 172.
   
 
 0.879
IFT81
IFT81_CH domain-containing protein.
   
 
 0.872
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.