STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NELL2Protein NEL. (816 aa)    
Predicted Functional Partners:
TMEM117
Transmembrane protein 117.
      
 0.742
PPP4R4
Protein phosphatase 4 regulatory subunit 4.
   
 
 0.720
WDR25
WD repeat domain 25.
    
 
 0.683
PEX3
Uncharacterized protein.
   
  
 0.674
ROBO4
Uncharacterized protein.
   
  
 0.610
ROBO2
Roundabout guidance receptor 2.
   
  
 0.610
EXO1
Uncharacterized protein.
   
  
 0.535
ASPN
Asporin.
    
 
 0.524
AMIGO1
Adhesion molecule with Ig like domain 1.
    
 
 0.506
SCAF11
RING-type domain-containing protein.
      
 0.486
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.