STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BET1t-SNARE coiled-coil homology domain-containing protein. (115 aa)    
Predicted Functional Partners:
YKT6
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 0.999
GOSR2
Uncharacterized protein.
   
 0.999
STX5
Syntaxin 5; Belongs to the syntaxin family.
   
 0.999
GOSR1
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
   
 0.998
SCFD1
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.998
SEC22B
Vesicle-trafficking protein SEC22b; SNARE involved in targeting and fusion of ER-derived transport vesicles with the Golgi complex as well as Golgi-derived retrograde transport vesicles with the ER.
   
 0.994
SEC22A
Longin domain-containing protein; Belongs to the synaptobrevin family.
   
 0.982
USO1
Uncharacterized protein.
   
 0.952
SEC22C
SEC22 homolog C, vesicle trafficking protein; Belongs to the synaptobrevin family.
   
 0.911
BET1L
t-SNARE coiled-coil homology domain-containing protein.
   
 
 
0.901
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.