STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5orf30Chromosome 5 open reading frame 30. (207 aa)    
Predicted Functional Partners:
RAB3IP
Uncharacterized protein.
      
 0.762
TRMT11
tRNA (guanine(10)-N2)-methyltransferase homolog; Catalytic subunit of an S-adenosyl-L-methionine-dependent tRNA methyltransferase complex that mediates the methylation of the guanosine nucleotide at position 10 (m2G10) in tRNAs.
      
 0.741
MAN2A1
Alpha-mannosidase.
      
 0.703
BRAP
Uncharacterized protein.
      
 0.702
VWC2
Von Willebrand factor C domain containing 2.
      
 0.627
CCNH
Cyclin H; Belongs to the cyclin family.
   
  
 0.586
UNC119
Unc-119 lipid binding chaperone.
    
 
 0.549
GRIK2
Glutamate ionotropic receptor kainate type subunit 2.
      
 0.534
NBR1
NBR1 autophagy cargo receptor.
      
 0.530
SPDEF
SAM pointed domain containing ETS transcription factor.
    
   0.519
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.