STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL16A1Uncharacterized protein. (464 aa)    
Predicted Functional Partners:
COL16A1-2
LAM_G_DOMAIN domain-containing protein.
 
      0.900
ENSGALP00000052829
Uncharacterized protein.
 
  
   0.865
COL21A1
VWFA domain-containing protein.
 
    
 0.843
COL6A6
Uncharacterized protein.
 
  
   0.625
VWA1
Von Willebrand factor A domain containing 1.
 
    
 0.595
PCOLCE2
Procollagen C-endopeptidase enhancer 2.
    
 
 0.589
ENSGALP00000066296
Uncharacterized protein.
  
 
   0.547
ENSGALP00000064853
Uncharacterized protein.
  
 
   0.545
ENSGALP00000071129
Uncharacterized protein.
  
 
   0.542
LOC112531190
Uncharacterized protein.
  
 
   0.541
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.