STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC171Coiled-coil domain containing 171. (1259 aa)    
Predicted Functional Partners:
RAB11FIP4
RAB11 family interacting protein 4.
      
 0.701
VEGFD
PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family.
      
 0.697
CLCN3
Chloride channel protein.
    
 
 0.599
RAB11FIP2
RAB11 family interacting protein 2.
    
 
 0.560
TMEM67
Transmembrane protein 67.
      
 0.481
SYNE2
Spectrin repeat containing nuclear envelope protein 2.
   
 
 0.471
KLHL36
Kelch like family member 36.
      
 0.454
KIAA0513
KIAA0513.
      
 0.438
MSANTD4
Myb/SANT DNA binding domain containing 4 with coiled-coils.
    
 
 0.414
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.