STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF1MHC class I antigen alpha chain; Belongs to the MHC class I family. (360 aa)    
Predicted Functional Partners:
CD8A-2
Ig-like domain-containing protein.
   
 0.995
B2M
Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.
   
0.993
BF2
Class I histocompatibility antigen, F10 alpha chain; Involved in the presentation of foreign antigens to the immune system.
  
0.981
CALR
Calreticulin.
    
 0.923
CALR3
Calreticulin.
    
 0.920
PDIA3
Protein disulfide-isomerase A3; Belongs to the protein disulfide isomerase family.
   
  0.919
CD8BP
Ig-like domain-containing protein.
   
  0.915
LOC770074
Ig-like domain-containing protein.
    
  0.915
LOC107053306
Ig-like domain-containing protein.
    
  0.912
LOC112529934
Ig-like domain-containing protein.
    
  0.912
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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