STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRDM2PR/SET domain 2. (1678 aa)    
Predicted Functional Partners:
ZNF512
Zinc finger protein 512.
   
 
 0.712
CAMKMT
Uncharacterized protein.
     
 0.693
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
   
 
  0.658
PDPN
Uncharacterized protein.
 
      0.654
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1; Forms hydroxylysine residues in -Xaa-Lys-Gly- sequences in collagens. These hydroxylysines serve as sites of attachment for carbohydrate units and are essential for the stability of the intermolecular collagen cross-links.
     
  0.650
SETDB1
SET domain bifurcated histone lysine methyltransferase 1.
    
 
 0.558
LOC769174
C-type lectin domain-containing protein.
    
 
 0.551
PRDM8
PR/SET domain 8.
      
 0.545
KDM3B
Lysine demethylase 3B.
      
 0.543
ASH1L
ASH1 like histone lysine methyltransferase.
   
 
 0.513
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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