STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D22BTBC1 domain family member 22B. (507 aa)    
Predicted Functional Partners:
GJD4
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
      
 0.862
GALNT9
Polypeptide N-acetylgalactosaminyltransferase.
      
 0.785
CCNY
Cyclin Y; Belongs to the cyclin family.
      
 0.765
LEPROTL1
Leptin receptor overlapping transcript like 1.
   
  
 0.740
NOVA1
Uncharacterized protein.
      
 0.703
PPP1R3D
Protein phosphatase 1 regulatory subunit 3D.
      
 0.701
RAB1B
Uncharacterized protein.
    
 
 0.661
GALR1
Galanin receptor; Belongs to the G-protein coupled receptor 1 family.
      
 0.625
SYCP2
Uncharacterized protein.
      
 0.625
MRPS6
28S ribosomal protein S6, mitochondrial; Belongs to the bacterial ribosomal protein bS6 family.
    
   0.611
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.