STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112529929IF rod domain-containing protein; Belongs to the intermediate filament family. (550 aa)    
Predicted Functional Partners:
KRT24
Keratin, type I cytoskeletal 19; Involved in the organization of myofibers. Together with KRT8, helps to link the contractile apparatus to dystrophin at the costameres of striated muscle (By similarity).
  
 
0.567
KRT13
IF rod domain-containing protein; Belongs to the intermediate filament family.
  
 
0.562
KRT14
Keratin, type I cytoskeletal 14; The nonhelical tail domain is involved in promoting KRT5- KRT14 filaments to self-organize into large bundles and enhances the mechanical properties involved in resilience of keratin intermediate filaments in vitro.
  
 
0.553
KRT40
IF rod domain-containing protein; Belongs to the intermediate filament family.
   
 
0.535
KRT12
Keratin 12; Belongs to the intermediate filament family.
   
 
0.535
ENSGALP00000048090
IF rod domain-containing protein; Belongs to the intermediate filament family.
 
 
 
0.535
LOC772080
IF rod domain-containing protein; Belongs to the intermediate filament family.
   
 
0.535
KRT18
Keratin 18; Belongs to the intermediate filament family.
   
 
0.535
LOC420039
IF rod domain-containing protein; Belongs to the intermediate filament family.
   
 
0.535
KRT17
IF rod domain-containing protein; Belongs to the intermediate filament family.
   
 
0.535
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.