STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FNDC10Fibronectin type III domain containing 10. (215 aa)    
Predicted Functional Partners:
WDR82
WD repeat-containing protein 82; Component of a chromatin regulatory complex involved in regulating chromatin structure in the nucleus; Belongs to the WD repeat SWD2 family.
   
 
 0.818
CPSF3
Cleavage and polyadenylation specific factor 3.
   
 
 0.810
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
   
 
 0.805
PCF11
PCF11 cleavage and polyadenylation factor subunit.
   
 
 0.804
CSTF2
RRM domain-containing protein.
   
 
 0.784
RBBP6
RB binding protein 6, ubiquitin ligase.
    
 
 0.774
GINS2
DNA replication complex GINS protein PSF2; Belongs to the GINS2/PSF2 family.
    
 
 0.719
JAZF1
Uncharacterized protein.
    
 
 0.709
CPSF4L
Uncharacterized protein.
   
 
 0.707
CPSF4
Uncharacterized protein.
   
 
 0.707
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.