WDYHV1 protein (Gallus gallus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

WDYHV1

WDYHV motif containing 1. (211 aa)

Predicted Functional Partners:

NTAN1

0.640

TRABD

0.628

QTRT1

0.628

OSTM1

0.627

GCDH

0.626

IBTK

0.626

FAM206A

0.580

ATE1

0.530

ABTB1

0.529

TMED6

0.527

Your Current Organism:

Gallus gallus

NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABTB1	IBTK	ENSGALP00000009637	ENSGALP00000070327	Uncharacterized protein.	Inhibitor of Bruton tyrosine kinase.	0.545
ABTB1	WDYHV1	ENSGALP00000009637	ENSGALP00000057221	Uncharacterized protein.	WDYHV motif containing 1.	0.529
ATE1	NTAN1	ENSGALP00000067454	ENSGALP00000059540	Arginyl-tRNA--protein transferase 1; Involved in the post-translational conjugation of arginine to the N-terminal aspartate or glutamate of a protein. This arginylation is required for degradation of the protein via the ubiquitin pathway. Belongs to the R-transferase family.	N-terminal asparagine amidase.	0.645
ATE1	WDYHV1	ENSGALP00000067454	ENSGALP00000057221	Arginyl-tRNA--protein transferase 1; Involved in the post-translational conjugation of arginine to the N-terminal aspartate or glutamate of a protein. This arginylation is required for degradation of the protein via the ubiquitin pathway. Belongs to the R-transferase family.	WDYHV motif containing 1.	0.530
FAM206A	WDYHV1	ENSGALP00000072766	ENSGALP00000057221	Protein Abitram; Actin-binding protein that regulates actin polymerization, filopodia dynamics and increases the branching of proximal dendrites of developing neurons; Belongs to the ABITRAM family.	WDYHV motif containing 1.	0.580
GCDH	OSTM1	ENSGALP00000068040	ENSGALP00000024656	Glutaryl-CoA dehydrogenase.	Uncharacterized protein.	0.535
GCDH	QTRT1	ENSGALP00000068040	ENSGALP00000067478	Glutaryl-CoA dehydrogenase.	Uncharacterized protein.	0.636
GCDH	TRABD	ENSGALP00000068040	ENSGALP00000044977	Glutaryl-CoA dehydrogenase.	Uncharacterized protein.	0.461
GCDH	WDYHV1	ENSGALP00000068040	ENSGALP00000057221	Glutaryl-CoA dehydrogenase.	WDYHV motif containing 1.	0.626
IBTK	ABTB1	ENSGALP00000070327	ENSGALP00000009637	Inhibitor of Bruton tyrosine kinase.	Uncharacterized protein.	0.545
IBTK	WDYHV1	ENSGALP00000070327	ENSGALP00000057221	Inhibitor of Bruton tyrosine kinase.	WDYHV motif containing 1.	0.626
NTAN1	ATE1	ENSGALP00000059540	ENSGALP00000067454	N-terminal asparagine amidase.	Arginyl-tRNA--protein transferase 1; Involved in the post-translational conjugation of arginine to the N-terminal aspartate or glutamate of a protein. This arginylation is required for degradation of the protein via the ubiquitin pathway. Belongs to the R-transferase family.	0.645
NTAN1	WDYHV1	ENSGALP00000059540	ENSGALP00000057221	N-terminal asparagine amidase.	WDYHV motif containing 1.	0.640
OSTM1	GCDH	ENSGALP00000024656	ENSGALP00000068040	Uncharacterized protein.	Glutaryl-CoA dehydrogenase.	0.535
OSTM1	QTRT1	ENSGALP00000024656	ENSGALP00000067478	Uncharacterized protein.	Uncharacterized protein.	0.627
OSTM1	TMED6	ENSGALP00000024656	ENSGALP00000000927	Uncharacterized protein.	GOLD domain-containing protein.	0.630
OSTM1	TRABD	ENSGALP00000024656	ENSGALP00000044977	Uncharacterized protein.	Uncharacterized protein.	0.629
OSTM1	WDYHV1	ENSGALP00000024656	ENSGALP00000057221	Uncharacterized protein.	WDYHV motif containing 1.	0.627
QTRT1	GCDH	ENSGALP00000067478	ENSGALP00000068040	Uncharacterized protein.	Glutaryl-CoA dehydrogenase.	0.636
QTRT1	OSTM1	ENSGALP00000067478	ENSGALP00000024656	Uncharacterized protein.	Uncharacterized protein.	0.627