STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC422513HECT domain-containing protein. (1054 aa)    
Predicted Functional Partners:
RNF151
Uncharacterized protein.
   
 
 0.786
PYURF
PIGY upstream reading frame.
      
 0.764
RBM18
RNA binding motif protein 18.
      
 0.762
ENSGALP00000068705
Uncharacterized protein.
 
 
   0.756
SUPT7L
SPT7 like, STAGA complex gamma subunit.
   
  
 0.741
CMTR1
Cap methyltransferase 1.
   
  
 0.738
DCTN3
Uncharacterized protein.
    
 
 0.712
PPP1R7
LRRcap domain-containing protein.
    
 
 0.710
OST4
Uncharacterized protein.
      
 0.705
SMDT1
Single-pass membrane protein with aspartate rich tail 1.
      
 0.704
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.