STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NUP210L-2Uncharacterized protein. (370 aa)    
Predicted Functional Partners:
NUP210L
BIG2 domain-containing protein.
 
     0.933
NUP210
Nucleoporin 210.
  
  
0.927
NUP107
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 
 0.678
NUP133
Nucleoporin 133.
   
 
 0.649
NUP35
Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family.
    
 
 0.643
SURF6
SURF6 domain-containing protein.
      
 0.626
AHCTF1
Uncharacterized protein.
    
 
 0.618
SEH1L
SEH1 like nucleoporin; Belongs to the WD repeat SEC13 family.
   
 
 0.614
NUP98
Nucleoporin 98.
   
 
 0.610
NUP155
Nucleoporin 155.
   
 
 0.602
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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