STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LYPD1LY6/PLAUR domain containing 1. (141 aa)    
Predicted Functional Partners:
KCNIP3
Uncharacterized protein.
      
 0.668
GPR39
G-protein coupled receptor 39; Belongs to the G-protein coupled receptor 1 family.
   
  
 0.644
GRIK4
Glutamate ionotropic receptor kainate type subunit 4.
      
 0.580
VAT1L
Vesicle amine transport 1 like.
      
 0.547
SHISAL1
Shisa like 1.
      
 0.536
VTA1
Vesicle trafficking 1.
      
 0.499
SMPDL3A
Acid sphingomyelinase-like phosphodiesterase.
      
 0.483
CTXN3
Uncharacterized protein.
      
 0.481
ERCC6L
ERCC excision repair 6 like, spindle assembly checkpoint helicase.
      
 0.479
LRTM1
Leucine rich repeats and transmembrane domains 1.
      
 0.467
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.