STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF34RING-type domain-containing protein. (359 aa)    
Predicted Functional Partners:
TTC1
Tetratricopeptide repeat domain 1.
   
  
 0.722
FAM105A
Uncharacterized protein.
      
 0.705
C3orf14
Chromosome 3 open reading frame 14.
      
 0.705
CHIC1
Erf4 domain-containing protein.
      
 0.620
SNX8
Sorting nexin 8.
      
 0.600
RTN4IP1
Reticulon 4 interacting protein 1.
      
 0.588
MRPL50
39S ribosomal protein L50, mitochondrial; Belongs to the mitochondrion-specific ribosomal protein mL50 family.
   
  
 0.586
GNL3
G protein nucleolar 3.
      
 0.539
GRAMD4
GRAM domain containing 4.
      
 0.538
PTP4A2
Protein tyrosine phosphatase 4A2.
   
  
 0.536
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.