STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D8TBC1 domain family member 8. (1145 aa)    
Predicted Functional Partners:
DIPK1C
Divergent protein kinase domain 1C.
      
 0.951
LONRF2
LON peptidase N-terminal domain and ring finger 2.
      
 0.849
PDCL3
Phosducin domain-containing protein.
      
 0.842
IPCEF1
PH domain-containing protein.
      
 0.841
LONRF3
LON peptidase N-terminal domain and ring finger 3.
      
 0.790
RNF149
Ring finger protein 149.
 
    
 0.774
CHST10
Carbohydrate sulfotransferase 10; Catalyzes the transfer of sulfate to position 3 of terminal glucuronic acid of both protein- and lipid-linked oligosaccharides. Participates in biosynthesis of HNK-1 carbohydrate structure, a sulfated glucuronyl-lactosaminyl residue carried by many neural recognition molecules, which is involved in cell interactions during ontogenetic development and in synaptic plasticity in the adult (By similarity).
      
 0.761
RPL31
Uncharacterized protein.
   
  
 0.755
MAP4K4
Mitogen-activated protein kinase kinase kinase kinase 4.
      
 0.609
NRK
Uncharacterized protein.
      
 0.586
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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