LRRC10 protein (Gallus gallus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LRRC10

Leucine rich repeat containing 10. (248 aa)

Predicted Functional Partners:

ADGRL3

0.682

ADGRL2

0.682

LRG1

0.540

ENSGALP00000068651

0.531

LRRC20

0.518

NRROS

0.517

LOC101749694

0.516

LUM

0.513

DCN

0.510

IGFALS

0.508

Your Current Organism:

Gallus gallus

NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADGRL2	DCN	ENSGALP00000056097	ENSGALP00000062069	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Decorin; May affect the rate of fibrils formation; Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily.	0.682
ADGRL2	ENSGALP00000068651	ENSGALP00000056097	ENSGALP00000068651	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Uncharacterized protein.	0.719
ADGRL2	IGFALS	ENSGALP00000056097	ENSGALP00000038622	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Insulin like growth factor binding protein acid labile subunit.	0.682
ADGRL2	LOC101749694	ENSGALP00000056097	ENSGALP00000043627	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Uncharacterized protein.	0.663
ADGRL2	LRG1	ENSGALP00000056097	ENSGALP00000041118	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	LRRCT domain-containing protein.	0.682
ADGRL2	LRRC10	ENSGALP00000056097	ENSGALP00000069070	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Leucine rich repeat containing 10.	0.682
ADGRL2	LRRC20	ENSGALP00000056097	ENSGALP00000045980	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Uncharacterized protein.	0.630
ADGRL2	LUM	ENSGALP00000056097	ENSGALP00000018370	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Lumican; Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class II subfamily.	0.682
ADGRL2	NRROS	ENSGALP00000056097	ENSGALP00000032932	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Negative regulator of reactive oxygen species.	0.682
ADGRL3	DCN	ENSGALP00000043995	ENSGALP00000062069	Adhesion G protein-coupled receptor L3; Belongs to the G-protein coupled receptor 2 family.	Decorin; May affect the rate of fibrils formation; Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily.	0.682
ADGRL3	ENSGALP00000068651	ENSGALP00000043995	ENSGALP00000068651	Adhesion G protein-coupled receptor L3; Belongs to the G-protein coupled receptor 2 family.	Uncharacterized protein.	0.705
ADGRL3	IGFALS	ENSGALP00000043995	ENSGALP00000038622	Adhesion G protein-coupled receptor L3; Belongs to the G-protein coupled receptor 2 family.	Insulin like growth factor binding protein acid labile subunit.	0.682
ADGRL3	LOC101749694	ENSGALP00000043995	ENSGALP00000043627	Adhesion G protein-coupled receptor L3; Belongs to the G-protein coupled receptor 2 family.	Uncharacterized protein.	0.663
ADGRL3	LRG1	ENSGALP00000043995	ENSGALP00000041118	Adhesion G protein-coupled receptor L3; Belongs to the G-protein coupled receptor 2 family.	LRRCT domain-containing protein.	0.682
ADGRL3	LRRC10	ENSGALP00000043995	ENSGALP00000069070	Adhesion G protein-coupled receptor L3; Belongs to the G-protein coupled receptor 2 family.	Leucine rich repeat containing 10.	0.682
ADGRL3	LRRC20	ENSGALP00000043995	ENSGALP00000045980	Adhesion G protein-coupled receptor L3; Belongs to the G-protein coupled receptor 2 family.	Uncharacterized protein.	0.630
ADGRL3	LUM	ENSGALP00000043995	ENSGALP00000018370	Adhesion G protein-coupled receptor L3; Belongs to the G-protein coupled receptor 2 family.	Lumican; Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class II subfamily.	0.682
ADGRL3	NRROS	ENSGALP00000043995	ENSGALP00000032932	Adhesion G protein-coupled receptor L3; Belongs to the G-protein coupled receptor 2 family.	Negative regulator of reactive oxygen species.	0.682
DCN	ADGRL2	ENSGALP00000062069	ENSGALP00000056097	Decorin; May affect the rate of fibrils formation; Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily.	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	0.682
DCN	ADGRL3	ENSGALP00000062069	ENSGALP00000043995	Decorin; May affect the rate of fibrils formation; Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily.	Adhesion G protein-coupled receptor L3; Belongs to the G-protein coupled receptor 2 family.	0.682