STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARMC2Armadillo repeat containing 2. (851 aa)    
Predicted Functional Partners:
PDZRN3
PDZ domain containing ring finger 3.
   
  
 0.769
PPP4R2
Serine/threonine-protein phosphatase 4 regulatory subunit 2; Regulatory subunit of serine/threonine-protein phosphatase 4 (PP4); Belongs to the PPP4R2 family.
      
 0.769
SHQ1
SHQ1, H/ACA ribonucleoprotein assembly factor.
   
  
 0.766
KAT6A
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
      
 0.707
MICAL1
Uncharacterized protein.
      
 0.707
EPB41L3
Erythrocyte membrane protein band 4.1 like 3.
    
 
 0.633
GRM8
Glutamate metabotropic receptor 8.
   
  
 0.588
ARNT
Uncharacterized protein.
      
 0.584
PROK2
Prokineticin 2.
      
 0.503
RC3H2
Ring finger and CCCH-type domains 2.
    
 
 0.492
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.