STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCLT1Sodium channel and clathrin linker 1. (444 aa)    
Predicted Functional Partners:
CEP89
Centrosomal protein 89.
      
 0.984
FBF1
Fas-binding factor 1 homolog; Keratin-binding protein required for epithelial cell polarization. Required for ciliogenesis (By similarity).
    
 
 0.976
CEP83
Centrosomal protein 83.
   
 
 0.969
CEP164
Centrosomal protein 164.
   
 
 0.937
CEP170
Centrosomal protein 170.
    
 
 0.799
LRRC45
Leucine-rich repeat-containing protein 45; Component of the proteinaceous fiber-like linker between two centrioles, required for centrosome cohesion.
    
 
 0.795
TBC1D32
TBC1 domain family member 32.
      
 0.762
C2CD3
Uncharacterized protein.
   
 
 0.757
CCDC73
Uncharacterized protein.
      
 0.752
ANKRD26
ANK_REP_REGION domain-containing protein.
    
 
 0.751
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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