STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA17Spermatogenesis associated 17. (363 aa)    
Predicted Functional Partners:
SPATA20
Spermatogenesis associated 20.
      
 0.836
SPATA4
Spermatogenesis associated 4.
   
  
 0.763
SPATA7
Spermatogenesis associated 7.
      
 0.747
SPATA6
Spermatogenesis associated 6.
      
 0.716
SPATA22
Spermatogenesis associated 22.
      
 0.711
TDRD1
Tudor domain containing 1.
      
 0.641
ACER3
Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.
   
  
 0.621
TTL
Uncharacterized protein.
   
  
 0.611
VRK2
VRK serine/threonine kinase 2.
      
 0.608
SOX30
Uncharacterized protein.
   
  
 0.606
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.