STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA22Spermatogenesis associated 22. (363 aa)    
Predicted Functional Partners:
MEIOB
Meiosis specific with OB-fold.
      
 0.980
SYCE3
Uncharacterized protein.
      
 0.847
SYCP3
Cor1 domain-containing protein.
      
 0.843
SPATA20
Spermatogenesis associated 20.
      
 0.772
SPO11
SPO11 initiator of meiotic double stranded breaks.
      
 0.720
SHPK
Uncharacterized protein.
      
 0.716
SPATA17
Spermatogenesis associated 17.
      
 0.711
HSF2BP
Heat shock transcription factor 2 binding protein.
      
 0.706
MEIOC
Meiosis specific with coiled-coil domain.
      
 0.701
HFM1-2
Helicase ATP-binding domain-containing protein.
      
 0.673
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.