STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CASTUncharacterized protein. (768 aa)    
Predicted Functional Partners:
CAPN1
Uncharacterized protein; Belongs to the peptidase C2 family.
   
 
 0.936
CAPN2
Calpain-2 catalytic subunit; Calcium-regulated non-lysosomal thiol-protease which catalyze limited proteolysis of substrates involved in cytoskeletal remodeling and signal transduction.
   
 
 0.932
CAPN11
Calpain-1 catalytic subunit; Calcium-regulated non-lysosomal thiol-protease which catalyze limited proteolysis of substrates involved in cytoskeletal remodeling and signal transduction; Belongs to the peptidase C2 family.
   
 
 0.932
CAPN3
Calpain-3; Calcium-regulated non-lysosomal thiol-protease; Belongs to the peptidase C2 family.
   
 
 0.904
CAPN9
Calpain 9; Belongs to the peptidase C2 family.
   
 
 0.796
CAPN5
Calpain 5; Belongs to the peptidase C2 family.
   
 
 0.763
CAPN13
Calpain 13; Belongs to the peptidase C2 family.
   
 
 0.760
CAPN7
Calpain 7; Belongs to the peptidase C2 family.
   
 
 0.743
CAPN8
Calpain 8; Belongs to the peptidase C2 family.
   
 
 0.741
CAPN10
Calpain 10; Belongs to the peptidase C2 family.
    
 
 0.737
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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