STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYEF2Uncharacterized protein. (616 aa)    
Predicted Functional Partners:
LUC7L3
Uncharacterized protein.
    
 
 0.778
CRNKL1
Crooked neck pre-mRNA splicing factor 1.
   
 0.711
ISY1
Uncharacterized protein.
   
 0.680
SYF2
Uncharacterized protein.
   
 0.677
HNRNPM
Uncharacterized protein.
  
0.639
TFIP11
Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events.
    
  0.633
CCDC12
Uncharacterized protein.
    
 0.633
CWF19L2
CWF19 like cell cycle control factor 2.
   
  0.609
CCDC130
Coiled-coil domain containing 130.
    
  0.598
RBM15
RNA binding motif protein 15.
    
 
 0.594
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.