STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APBB3Amyloid beta precursor protein binding family B member 3. (504 aa)    
Predicted Functional Partners:
APBB2-2
Uncharacterized protein.
 
    
 0.977
APBB2
PID domain-containing protein.
 
   
 0.929
APP
BPTI/Kunitz inhibitor domain-containing protein.
    
 
 0.735
SPPL2A
PA domain-containing protein.
      
 0.678
THYN1
Thymocyte nuclear protein 1; Specifically binds 5-hydroxymethylcytosine (5hmC), suggesting that it acts as a specific reader of 5hmC.
      
 0.639
AP4E1
Adaptor related protein complex 4 subunit epsilon 1.
    
 
 0.637
LIMCH1
LIM zinc-binding domain-containing protein.
    
 
 0.624
PKP4
Uncharacterized protein.
    
 
 0.622
TMEM179
Uncharacterized protein.
      
 0.601
RIN3
Ras and Rab interactor 3.
    
 
 0.594
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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