TRANK1 protein (Gallus gallus) - STRING interaction network

Nodes:

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

TRANK1

Tetratricopeptide repeat and ankyrin repeat containing 1. (2213 aa)

Predicted Functional Partners:

SCAF8

0.749

SCAF4

0.749

NFX1

0.709

ZNFX1

0.707

LY6E

0.580

EXOSC10

0.535

OASL

0.533

XRN2

0.505

DROSHA

0.500

PCF11

0.481

Your Current Organism:

Gallus gallus

NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DROSHA	EXOSC10	ENSGALP00000042067	ENSGALP00000004870	Uncharacterized protein.	HRDC domain-containing protein.	0.611
DROSHA	TRANK1	ENSGALP00000042067	ENSGALP00000072059	Uncharacterized protein.	Tetratricopeptide repeat and ankyrin repeat containing 1.	0.500
DROSHA	XRN2	ENSGALP00000042067	ENSGALP00000013622	Uncharacterized protein.	5'-3' exoribonuclease 2; Possesses 5'->3' exoribonuclease activity. May promote the termination of transcription by RNA polymerase II (By similarity). Belongs to the 5'-3' exonuclease family. XRN2/RAT1 subfamily.	0.759
EXOSC10	DROSHA	ENSGALP00000004870	ENSGALP00000042067	HRDC domain-containing protein.	Uncharacterized protein.	0.611
EXOSC10	SCAF4	ENSGALP00000004870	ENSGALP00000053040	HRDC domain-containing protein.	Uncharacterized protein.	0.600
EXOSC10	SCAF8	ENSGALP00000004870	ENSGALP00000022143	HRDC domain-containing protein.	SR-related CTD associated factor 8.	0.604
EXOSC10	TRANK1	ENSGALP00000004870	ENSGALP00000072059	HRDC domain-containing protein.	Tetratricopeptide repeat and ankyrin repeat containing 1.	0.535
EXOSC10	XRN2	ENSGALP00000004870	ENSGALP00000013622	HRDC domain-containing protein.	5'-3' exoribonuclease 2; Possesses 5'->3' exoribonuclease activity. May promote the termination of transcription by RNA polymerase II (By similarity). Belongs to the 5'-3' exonuclease family. XRN2/RAT1 subfamily.	0.668
LY6E	OASL	ENSGALP00000048628	ENSGALP00000028664	Lymphocyte antigen 6E.	Uncharacterized protein.	0.519
LY6E	TRANK1	ENSGALP00000048628	ENSGALP00000072059	Lymphocyte antigen 6E.	Tetratricopeptide repeat and ankyrin repeat containing 1.	0.580
NFX1	TRANK1	ENSGALP00000048993	ENSGALP00000072059	Nuclear transcription factor, X-box binding 1.	Tetratricopeptide repeat and ankyrin repeat containing 1.	0.709
NFX1	ZNFX1	ENSGALP00000048993	ENSGALP00000007750	Nuclear transcription factor, X-box binding 1.	Zinc finger NFX1-type containing 1.	0.677
OASL	LY6E	ENSGALP00000028664	ENSGALP00000048628	Uncharacterized protein.	Lymphocyte antigen 6E.	0.519
OASL	TRANK1	ENSGALP00000028664	ENSGALP00000072059	Uncharacterized protein.	Tetratricopeptide repeat and ankyrin repeat containing 1.	0.533
OASL	ZNFX1	ENSGALP00000028664	ENSGALP00000007750	Uncharacterized protein.	Zinc finger NFX1-type containing 1.	0.593
PCF11	SCAF4	ENSGALP00000027831	ENSGALP00000053040	PCF11 cleavage and polyadenylation factor subunit.	Uncharacterized protein.	0.733
PCF11	SCAF8	ENSGALP00000027831	ENSGALP00000022143	PCF11 cleavage and polyadenylation factor subunit.	SR-related CTD associated factor 8.	0.946
PCF11	TRANK1	ENSGALP00000027831	ENSGALP00000072059	PCF11 cleavage and polyadenylation factor subunit.	Tetratricopeptide repeat and ankyrin repeat containing 1.	0.481
PCF11	XRN2	ENSGALP00000027831	ENSGALP00000013622	PCF11 cleavage and polyadenylation factor subunit.	5'-3' exoribonuclease 2; Possesses 5'->3' exoribonuclease activity. May promote the termination of transcription by RNA polymerase II (By similarity). Belongs to the 5'-3' exonuclease family. XRN2/RAT1 subfamily.	0.665
SCAF4	EXOSC10	ENSGALP00000053040	ENSGALP00000004870	Uncharacterized protein.	HRDC domain-containing protein.	0.600