STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB4ARAB4A, member RAS oncogene family. (255 aa)    
Predicted Functional Partners:
RBSN
Rabenosyn, RAB effector.
    
 0.991
RUFY1
Uncharacterized protein.
    
 0.933
TBC1D16
TBC1 domain family member 16.
    
 0.804
RIN2
Ras and Rab interactor 2.
    
 
 0.739
ITSN2
Intersectin 2.
    
 
 0.648
RAB5A
Uncharacterized protein.
  
0.643
RABEP1
Uncharacterized protein.
    
 
 0.636
SNX17
Sorting nexin 17.
    
 
 0.608
MYOT
Myotilin.
      
 0.601
ITSN1
Intersectin 1.
    
 
 0.578
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.