STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMO3LIM domain only 3. (156 aa)    
Predicted Functional Partners:
LDB1
LIM domain-binding protein 1; Binds to the LIM domain of a wide variety of LIM domain- containing transcription factors.
    
 
 0.706
LDB2
LIM domain-binding protein 2; Binds to the LIM domain of a wide variety of LIM domain- containing transcription factors.
    
 
 0.655
KCNIP3
Uncharacterized protein.
    
 
 0.609
KCTD20
Potassium channel tetramerization domain containing 20.
      
 0.587
NKX2-1
Homeobox domain-containing protein.
    
 
 0.550
LEUTX
Homeobox domain-containing protein.
    
 
 0.542
CBLN2
Cerebellin 2.
   
  
 0.524
CUX2
Homeobox protein cut-like.
   
 
 0.516
GBX1
Gastrulation brain homeobox 1.
    
 
 0.506
ETV1
Ets domain protein.
    
 
 0.500
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.