STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SME93377.1EamA-like transporter family protein. (314 aa)    
Predicted Functional Partners:
menB
1,4-Dihydroxy-2-naphthoyl-CoA synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily.
       0.791
SME93386.1
Transcriptional regulator, GntR family.
 
   
 0.688
SMF04832.1
Acetyltransferase (GNAT) family protein.
 
     0.577
SMF48730.1
Na+-driven multidrug efflux pump.
 
 
 0.527
SME93392.1
Quaternary ammonium compound-resistance protein SugE.
       0.471
SME93403.1
Transcriptional regulator, TetR family.
       0.449
SMF12618.1
Hypothetical protein.
 
     0.435
SMF37633.1
RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily.
 
     0.420
SMF16401.1
Hypothetical protein.
 
     0.416
SMF04287.1
Hypothetical protein.
  
   
 0.414
Your Current Organism:
Cellulosimicrobium cellulans
NCBI taxonomy Id: 903523
Other names: C. cellulans J1, Cellulosimicrobium cellulans J1, Cellulosimicrobium cellulans str. J1, Cellulosimicrobium cellulans strain J1
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