TAGLN protein (Pavo cristatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

TAGLN

Transgelin. (200 aa)

Predicted Functional Partners:

ACTA2

0.803

ENSPSTP00000008626

0.797

NME8

0.770

ENSPSTP00000021218

0.650

ENSPSTP00000002026

0.634

ENSPSTP00000004972

0.634

MYL9

0.629

ENSPSTP00000010086

0.629

ENSPSTP00000008263

0.611

ENSPSTP00000026150

0.611

Your Current Organism:

Pavo cristatus

NCBI taxonomy Id: 9049
Other names: Indian peafowl, P. cristatus, blue peafowl

Export your current network:

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same PNG format, but at higher resolution

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACTA2	ENSPSTP00000002026	ENSPSTP00000024649	ENSPSTP00000002026	Actin alpha 2, smooth muscle.	annotation not available	0.825
ACTA2	ENSPSTP00000004972	ENSPSTP00000024649	ENSPSTP00000004972	Actin alpha 2, smooth muscle.	annotation not available	0.798
ACTA2	ENSPSTP00000008263	ENSPSTP00000024649	ENSPSTP00000008263	Actin alpha 2, smooth muscle.	annotation not available	0.936
ACTA2	ENSPSTP00000008626	ENSPSTP00000024649	ENSPSTP00000008626	Actin alpha 2, smooth muscle.	annotation not available	0.554
ACTA2	ENSPSTP00000010086	ENSPSTP00000024649	ENSPSTP00000010086	Actin alpha 2, smooth muscle.	annotation not available	0.874
ACTA2	ENSPSTP00000026150	ENSPSTP00000024649	ENSPSTP00000026150	Actin alpha 2, smooth muscle.	annotation not available	0.936
ACTA2	MYL9	ENSPSTP00000024649	ENSPSTP00000007934	Actin alpha 2, smooth muscle.	Myosin light chain 9.	0.904
ACTA2	NME8	ENSPSTP00000024649	ENSPSTP00000021728	Actin alpha 2, smooth muscle.	NME/NM23 family member 8.	0.594
ACTA2	TAGLN	ENSPSTP00000024649	ENSPSTP00000000039	Actin alpha 2, smooth muscle.	Transgelin.	0.803
ENSPSTP00000002026	ACTA2	ENSPSTP00000002026	ENSPSTP00000024649	annotation not available	Actin alpha 2, smooth muscle.	0.825
ENSPSTP00000002026	ENSPSTP00000008263	ENSPSTP00000002026	ENSPSTP00000008263	annotation not available	annotation not available	0.866
ENSPSTP00000002026	ENSPSTP00000008626	ENSPSTP00000002026	ENSPSTP00000008626	annotation not available	annotation not available	0.554
ENSPSTP00000002026	ENSPSTP00000010086	ENSPSTP00000002026	ENSPSTP00000010086	annotation not available	annotation not available	0.856
ENSPSTP00000002026	ENSPSTP00000026150	ENSPSTP00000002026	ENSPSTP00000026150	annotation not available	annotation not available	0.866
ENSPSTP00000002026	MYL9	ENSPSTP00000002026	ENSPSTP00000007934	annotation not available	Myosin light chain 9.	0.864
ENSPSTP00000002026	NME8	ENSPSTP00000002026	ENSPSTP00000021728	annotation not available	NME/NM23 family member 8.	0.594
ENSPSTP00000002026	TAGLN	ENSPSTP00000002026	ENSPSTP00000000039	annotation not available	Transgelin.	0.634
ENSPSTP00000004972	ACTA2	ENSPSTP00000004972	ENSPSTP00000024649	annotation not available	Actin alpha 2, smooth muscle.	0.798
ENSPSTP00000004972	ENSPSTP00000008263	ENSPSTP00000004972	ENSPSTP00000008263	annotation not available	annotation not available	0.866
ENSPSTP00000004972	ENSPSTP00000008626	ENSPSTP00000004972	ENSPSTP00000008626	annotation not available	annotation not available	0.554