TRAIP protein (Pavo cristatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

TRAIP

TRAF interacting protein. (464 aa)

Predicted Functional Partners:

ENSPSTP00000014297

0.745

FANCD2

0.676

CDC45

0.665

MON1A

0.599

EME1

0.549

ENSPSTP00000008230

0.537

DONSON

0.537

ENSPSTP00000000096

0.519

ENSPSTP00000021804

0.519

ENSPSTP00000022620

0.519

Your Current Organism:

Pavo cristatus

NCBI taxonomy Id: 9049
Other names: Indian peafowl, P. cristatus, blue peafowl

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDC45	DONSON	ENSPSTP00000013295	ENSPSTP00000008411	Cell division cycle 45.	Downstream neighbor of SON.	0.541
CDC45	ENSPSTP00000000096	ENSPSTP00000013295	ENSPSTP00000000096	Cell division cycle 45.	annotation not available	0.457
CDC45	ENSPSTP00000008230	ENSPSTP00000013295	ENSPSTP00000008230	Cell division cycle 45.	annotation not available	0.550
CDC45	ENSPSTP00000014297	ENSPSTP00000013295	ENSPSTP00000014297	Cell division cycle 45.	annotation not available	0.600
CDC45	ENSPSTP00000021804	ENSPSTP00000013295	ENSPSTP00000021804	Cell division cycle 45.	annotation not available	0.457
CDC45	ENSPSTP00000022620	ENSPSTP00000013295	ENSPSTP00000022620	Cell division cycle 45.	annotation not available	0.457
CDC45	FANCD2	ENSPSTP00000013295	ENSPSTP00000012071	Cell division cycle 45.	FA complementation group D2.	0.652
CDC45	TRAIP	ENSPSTP00000013295	ENSPSTP00000000045	Cell division cycle 45.	TRAF interacting protein.	0.665
DONSON	CDC45	ENSPSTP00000008411	ENSPSTP00000013295	Downstream neighbor of SON.	Cell division cycle 45.	0.541
DONSON	TRAIP	ENSPSTP00000008411	ENSPSTP00000000045	Downstream neighbor of SON.	TRAF interacting protein.	0.537
EME1	ENSPSTP00000008230	ENSPSTP00000025190	ENSPSTP00000008230	Essential meiotic structure-specific endonuclease 1.	annotation not available	0.691
EME1	FANCD2	ENSPSTP00000025190	ENSPSTP00000012071	Essential meiotic structure-specific endonuclease 1.	FA complementation group D2.	0.853
EME1	TRAIP	ENSPSTP00000025190	ENSPSTP00000000045	Essential meiotic structure-specific endonuclease 1.	TRAF interacting protein.	0.549
ENSPSTP00000000096	CDC45	ENSPSTP00000000096	ENSPSTP00000013295	annotation not available	Cell division cycle 45.	0.457
ENSPSTP00000000096	ENSPSTP00000022620	ENSPSTP00000000096	ENSPSTP00000022620	annotation not available	annotation not available	0.899
ENSPSTP00000000096	TRAIP	ENSPSTP00000000096	ENSPSTP00000000045	annotation not available	TRAF interacting protein.	0.519
ENSPSTP00000008230	CDC45	ENSPSTP00000008230	ENSPSTP00000013295	annotation not available	Cell division cycle 45.	0.550
ENSPSTP00000008230	EME1	ENSPSTP00000008230	ENSPSTP00000025190	annotation not available	Essential meiotic structure-specific endonuclease 1.	0.691
ENSPSTP00000008230	ENSPSTP00000014297	ENSPSTP00000008230	ENSPSTP00000014297	annotation not available	annotation not available	0.579
ENSPSTP00000008230	FANCD2	ENSPSTP00000008230	ENSPSTP00000012071	annotation not available	FA complementation group D2.	0.698