Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EPDR1Ependymin related 1. (454 aa)    
Predicted Functional Partners:
SQSTM1
Sequestosome 1.
    
 
 0.804
AOAH
Acyloxyacyl hydrolase.
      
 0.735
ENSPSTP00000023484
annotation not available
      
 0.705
NHS
NHS actin remodeling regulator.
      
 0.702
NME8
NME/NM23 family member 8.
    
 
 0.684
EXOSC3
Exosome component 3.
      
 0.683
CPD
Carboxypeptidase D.
      
 0.682
ENSPSTP00000021705
annotation not available
      
 0.651
ENSPSTP00000010562
annotation not available
      
 0.645
JDP2
Jun dimerization protein 2.
      
 0.577
Your Current Organism:
Pavo cristatus
NCBI taxonomy Id: 9049
Other names: Indian peafowl, P. cristatus, blue peafowl
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