Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MRPL54Mitochondrial ribosomal protein L54. (134 aa)    
Predicted Functional Partners:
MRPL27
Mitochondrial ribosomal protein L27.
   
 
 0.977
MRPL41
Mitochondrial ribosomal protein L41.
   
 
 0.944
MRPS16
Mitochondrial ribosomal protein S16.
   
   0.940
MRPL46
Mitochondrial ribosomal protein L46.
   
 
 0.928
MRPL43
Mitochondrial ribosomal protein L43.
   
 
 0.925
MRPL34
Mitochondrial ribosomal protein L34.
   
 
 0.917
MRPS25
Mitochondrial ribosomal protein S25.
   
 
 0.915
ENSPSTP00000007770
annotation not available
   
   0.907
MRPL20
Mitochondrial ribosomal protein L20.
   
 
 0.907
ENSPSTP00000000709
annotation not available
   
 
 0.900
Your Current Organism:
Pavo cristatus
NCBI taxonomy Id: 9049
Other names: Indian peafowl, P. cristatus, blue peafowl
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