Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRANK1Tetratricopeptide repeat and ankyrin repeat containing 1. (2596 aa)    
Predicted Functional Partners:
POLR2C
RNA polymerase II subunit C.
    
 
 0.813
DROSHA
Drosha ribonuclease III.
   
 
 0.803
XRN2
5'-3' exoribonuclease 2.
   
 
 0.768
SCAF4
SR-related CTD associated factor 4.
   
 
 0.765
ENSPSTP00000015178
annotation not available
   
 
 0.765
ENSPSTP00000020234
annotation not available
   
 
 0.765
WRN
WRN RecQ like helicase.
   
 
 0.703
ENSPSTP00000004559
annotation not available
    
 
 0.698
NCBP1
Nuclear cap binding protein subunit 1.
    
 
 0.698
SUPT4H1
SPT4 homolog, DSIF elongation factor subunit.
    
 
 0.675
Your Current Organism:
Pavo cristatus
NCBI taxonomy Id: 9049
Other names: Indian peafowl, P. cristatus, blue peafowl
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