USP38 protein (Pavo cristatus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

USP38

Ubiquitin specific peptidase 38. (908 aa)

Predicted Functional Partners:

ENSPSTP00000017263

0.809

ENSPSTP00000013793

0.801

STING1

0.801

MRPL38

0.701

PCNA

0.672

FANCD2

0.612

ENSPSTP00000000726

0.578

ENSPSTP00000007607

0.575

ENSPSTP00000018471

0.575

ENSPSTP00000021495

0.575

Your Current Organism:

Pavo cristatus

NCBI taxonomy Id: 9049
Other names: Indian peafowl, P. cristatus, blue peafowl

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPSTP00000000726	ENSPSTP00000017263	ENSPSTP00000000726	ENSPSTP00000017263	annotation not available	annotation not available	0.687
ENSPSTP00000000726	USP38	ENSPSTP00000000726	ENSPSTP00000001346	annotation not available	Ubiquitin specific peptidase 38.	0.578
ENSPSTP00000007607	ENSPSTP00000017263	ENSPSTP00000007607	ENSPSTP00000017263	annotation not available	annotation not available	0.956
ENSPSTP00000007607	USP38	ENSPSTP00000007607	ENSPSTP00000001346	annotation not available	Ubiquitin specific peptidase 38.	0.575
ENSPSTP00000013793	STING1	ENSPSTP00000013793	ENSPSTP00000014887	annotation not available	Stimulator of interferon response cGAMP interactor 1.	0.999
ENSPSTP00000013793	USP38	ENSPSTP00000013793	ENSPSTP00000001346	annotation not available	Ubiquitin specific peptidase 38.	0.801
ENSPSTP00000017263	ENSPSTP00000000726	ENSPSTP00000017263	ENSPSTP00000000726	annotation not available	annotation not available	0.687
ENSPSTP00000017263	ENSPSTP00000007607	ENSPSTP00000017263	ENSPSTP00000007607	annotation not available	annotation not available	0.956
ENSPSTP00000017263	ENSPSTP00000018471	ENSPSTP00000017263	ENSPSTP00000018471	annotation not available	annotation not available	0.956
ENSPSTP00000017263	ENSPSTP00000021495	ENSPSTP00000017263	ENSPSTP00000021495	annotation not available	annotation not available	0.956
ENSPSTP00000017263	FANCD2	ENSPSTP00000017263	ENSPSTP00000012071	annotation not available	FA complementation group D2.	0.962
ENSPSTP00000017263	PCNA	ENSPSTP00000017263	ENSPSTP00000018659	annotation not available	Proliferating cell nuclear antigen.	0.850
ENSPSTP00000017263	USP38	ENSPSTP00000017263	ENSPSTP00000001346	annotation not available	Ubiquitin specific peptidase 38.	0.809
ENSPSTP00000018471	ENSPSTP00000017263	ENSPSTP00000018471	ENSPSTP00000017263	annotation not available	annotation not available	0.956
ENSPSTP00000018471	USP38	ENSPSTP00000018471	ENSPSTP00000001346	annotation not available	Ubiquitin specific peptidase 38.	0.575
ENSPSTP00000021495	ENSPSTP00000017263	ENSPSTP00000021495	ENSPSTP00000017263	annotation not available	annotation not available	0.956
ENSPSTP00000021495	USP38	ENSPSTP00000021495	ENSPSTP00000001346	annotation not available	Ubiquitin specific peptidase 38.	0.575
FANCD2	ENSPSTP00000017263	ENSPSTP00000012071	ENSPSTP00000017263	FA complementation group D2.	annotation not available	0.962
FANCD2	PCNA	ENSPSTP00000012071	ENSPSTP00000018659	FA complementation group D2.	Proliferating cell nuclear antigen.	0.939
FANCD2	USP38	ENSPSTP00000012071	ENSPSTP00000001346	FA complementation group D2.	Ubiquitin specific peptidase 38.	0.612